Billing software for pharmacy & medical stores — batch, expiry and GST billing from ₹399/mo
For a pharmacy or medical store, 399Apps pairs Nidhi Inventory — with batch and expiry tracking, barcode billing and reorder alerts — with Nidhi Books for GST-compliant invoices and GSTR-ready returns. From ₹399/mo (first app; +₹99/mo per add-on, GST extra), unlimited users, so every counter and pharmacist works from one live stock.
14-day free trial · No card required · Unlimited users included
What is the best billing software for a pharmacy or medical store?
The best billing software for a pharmacy or medical store handles batch and expiry tracking, bills fast with barcodes, applies the right GST rate per medicine, and reorders fast-moving stock before it runs out. 399Apps does this with Nidhi Inventory for batch/expiry stock control and Nidhi Books for GST-compliant billing and returns.
Pharmacies look for one when expiry losses pile up, when stock across racks is hard to track, or when GST billing and reorder need to be in one system the whole counter can use.
Pharmacy pains → what 399Apps actually does
Batch, expiry and barcode tracking are real Nidhi Inventory capabilities — nothing below is invented.
| What slows you down | What 399Apps does |
|---|---|
| Losses from expired / near-expiry medicines | Nidhi Inventory tracks stock at batch level with expiry, so you can spot and clear near-expiry stock before it is a write-off. |
| Hard to find stock across racks and strips | Barcode + batch + serial tracking with multi-location stock gives a live, scan-first view of on-hand quantity. |
| Different GST rates on medicines (5% / 12% / 18%) | Nidhi Books uses date-aware tax rates with HSN, so each product carries the correct CGST/SGST/IGST on every invoice. |
| Fast movers run out | Reorder automation raises PO drafts from your min/max levels per item, so best-sellers stay in stock. |
| Sales returns and credit notes | Nidhi Books issues GST credit notes that flow into your GSTR-1 export correctly. |
| Month-end GST filing | GSTR-1 and GSTR-3B summaries export as CA-ready CSV from Nidhi Books. |
Why pharmacies choose 399Apps
Batch/expiry stock control and GST billing in one flat-priced cloud system.
- ✓ Batch + expiry tracking so you control near-expiry losses, not chase them.
- ✓ Barcode-first billing — any keystroke-emitting USB/Bluetooth scanner works.
- ✓ GST-native invoices with date-aware rates, HSN and GSTR-ready exports.
- ✓ Reorder automation keeps fast-moving medicines on the shelf.
- ✓ Unlimited users from ₹399/mo for the first app (+₹99/mo per add-on, prices exclude GST).
Honest scope note: 399Apps gives you GST billing plus batch/expiry inventory — it is not a dedicated drug-licence or Schedule-H statutory-register product. If you need a specific regulatory register, keep that workflow and use 399Apps for GST billing, stock and accounts.
Pricing for pharmacies & medical stores
Start with Nidhi Inventory for batch/expiry and barcode stock, or Nidhi Books for GST billing — your first app is ₹399/mo with unlimited users. Add the second app at +₹99/mo so billing and stock share one item list. Prices exclude GST. No per-seat fees for counter staff or pharmacists.
Billing software for pharmacy & medical store — frequently asked questions
Does 399Apps track batch and expiry for a pharmacy? +
Can it handle different GST rates on medicines? +
Does 399Apps support barcode billing for a medical store? +
Is 399Apps a drug-licence or Schedule-H compliance product? +
How much does pharmacy billing software cost on 399Apps? +
Try 399Apps for pharmacies & medical stores — free for 14 days
GST billing, accounting and inventory with unlimited users and no per-seat fee. From ₹399/month for your first app; +₹99/month per add-on (prices exclude GST).